Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923346.1_cds_XP_016471972.1_64254
CDS Infomation

[gene=LOC107794033] [db_xref=GeneID:107794033] [protein=uncharacterized protein LOC107794033] [protein_id=XP_016471972.1] [location=join(50188..51339,53125..53299,54786..54898,55049..55147,55945..56014,56504..56559,60097..60147,60280..60384,60597..60641,61367..61475,62013..62215,63677..63760,63986..64177)] [gbkey=CDS]
Sequence

ATGGATCATTCATGGCGTCCTCATCTTCCACCACCCCCAATCCAAGGTAGAATCTGTCCT
ACTTGCTCAATCTCACACTTCCCTTTTTGCCCTGCACCACCCCCACCCCCACCCCCTTTC
CCTTCAAATCCTAGTTTCACCCAATATCCACCTTATCCTCCTCATCAATCCCTCCCCCGC
CCTCCGCTTCCACCCCAACCGGCGGCTTACGACCCCTTCGTCGATCATCGCGCTGGGCCC
TCCATGCCCCCTCAAGTTCATCCGCGACCGTCCGATGCATATGAAAATACAAACCCTAGT
TTTGATTCCGGTAATGTTGGAGTAAAGAGAATGAGAATCGATGATTCAACAGGTTCGTTT
ATGAACGAAAACTTGACAAATTTAGCTAGGGTTTCAACTGATAACGAAAGGAGATTGAAA
CTGATTAGTGAGTTTGGTGCAGCGAATCACGAATTAGACATGGGGCATGGTAGCTTTGAT
GGTGGAAAATACGGAAAGTTTGATGGATTTTTAGGTGCTAAAACTAGCAATAATAGAAGT
TGTATTGATCCAGGTTATGGTAATTTGGATAGAAAACGAACATTTCATGAGCAAGAACAT
TTTGGAAAATTAGGATATGATGAAGTTGACAATTATTTGCCACGAAAAAATGGTTACAAA
TACAGTAATCCTCAAGCTGATAGTTACCGCCACAATGTAGAGCACGACCGACAGATTAAA
CTGTATCATGGACAACAGACCCCCATGGATGGTCACGGTCATAGCCTTAACCATTATTCG
GAGGCTGCTTATGCAATGCAAAATAGTCATATGGAGTCGAAATTACTTCACTATGGTTCG
TCATACGACCAAAGGGTTGTTAATTCAGTGAATGGCAGTGGCATGAGCTTGTATTCAGCA
CAACAGGGTTGTAAGGCATTTGCTAGCCAGCCGCCCCTTCCAGCTTCTCCACCACCTCCT
CTTCCAATGGAGCCGCCTCGGCATGAGCGGCTTGTTTTGTCTTCACCACCTGGAACATCT
GCCTCATTTTTTCCAGTTTCTGTTGGTTCTTCAGCTCCTTTGTCATCAACTTATCCTCCA
CCTCCTGAATATAATCATTCCATATCAAGTTATCAGTCCAATCTACATGTTTCCTCCGCA
TCTGCAAATGAGGAACTCCATATGCTCCGCTATACGTCATCATCTATGAGCTCCAGAGGA
AGTGAACAAACTTTGCGTGACCTACCTTTGGAGAAGTCAAAAGTCATTGATGCTTCTCAC
ATACTAAGGCATCCATACCGTGCTACCCGCCCTGATCATCTTGTTATAATTCTTCGGGGG
CTTCCAGGGAGTGGAAAGAGCTATTTGGCAAAGATGTTACGTGACCTTGAGATTGAAAAC
TGTGGCACTGCGCCTCGCATTCACTCAATGGACGATTACTTCATGACTGAAGTTGATAAG
GTTGAAGAGAGTGAGATTTCAAAATCTTCTGGTTCTGTCAGAAGCAAAAAAATCACAAAG
AAGGTCATGGAATACTGCTATGAACCTGAGATGGAGGAGGCCTATCGGTCCAGCATGTTG
AAGTCTTTTAAAAAGACCCTGGATGAGGGGGCTTTCTCTTTCGTAATTGTGGATGACCGC
AATCTGCGGGTAGCTGATTTTGCTCAGTTTTGGGCAACTGCAAAGAGATCTGGTTATGAA
GTGTACTTGCTAGAGGCGACCTATAAGGACCCAGCGGGATGTGCAGCAAGGAATGTACAT
GGTTTTACGCGGGATGACGTGCAAAAGATGGCTGCCCAATGGGAGGAAGCTCCATCCATG
TACTTGAAACTTGATACTAAGTCATTACTTCATGGAGATGCTCTGGAGGAGGGTGGAATC
CAAGAGGTGGACATGGACATGGAAGATGATGACTCATTGGGAATGCCTTCTGCTTTAGAT
GAAGAAAACATTGAGAAGTTTAGTATACCTCCCCAAGAGGATATTCTGGCTGATGGCGAT
TTAAAGGATGATCAGGAGTCGGACCATGAAGTTGACCAAATAGCTGAAGTAAAAGGATTA
GCAAAGAGTAAATGGTCTTCTGATTTGGATGAAGATGATACTCGAAGAAATGAAGACGCC
ACTAAAAACTTGAATGCTCTCTCAGGGTTGATACAATCTTACAGCAAAGAAGGGAAATCA
GTACGTTGGGGTGACCAGGTGACCAAAAGAGGCTTTTCGATAGGGGCAACAAAAGCTACC
AATGTATCCTTATTAATTGGTCCTGGTGCAGGATACAACTTGAAGTCTAACCCTTTGCCG
GAAGAAGAGAAGTTGATATCAGCTAGAAATAATGGTGAACCAAAGAAGCAAAACATATTT
CAAGAGAGACTACGAGCTGAGCGTGAGTCGTTTAGGGCTGTTTTCGAGTCTTTCAGAACA
GGCTCTGACAAGAGGCGGCATCGGATATCTGGGCTTAATGCTGAAGGTGAATAG

Peptide Sequence

PEP ID

XP_016471972.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107794033 [Nicotiana tabacum]
Sequence

MDHSWRPHLPPPPIQGRICPTCSISHFPFCPAPPPPPPPFPSNPSFTQYPPYPPHQSLPR
PPLPPQPAAYDPFVDHRAGPSMPPQVHPRPSDAYENTNPSFDSGNVGVKRMRIDDSTGSF
MNENLTNLARVSTDNERRLKLISEFGAANHELDMGHGSFDGGKYGKFDGFLGAKTSNNRS
CIDPGYGNLDRKRTFHEQEHFGKLGYDEVDNYLPRKNGYKYSNPQADSYRHNVEHDRQIK
LYHGQQTPMDGHGHSLNHYSEAAYAMQNSHMESKLLHYGSSYDQRVVNSVNGSGMSLYSA
QQGCKAFASQPPLPASPPPPLPMEPPRHERLVLSSPPGTSASFFPVSVGSSAPLSSTYPP
PPEYNHSISSYQSNLHVSSASANEELHMLRYTSSSMSSRGSEQTLRDLPLEKSKVIDASH
ILRHPYRATRPDHLVIILRGLPGSGKSYLAKMLRDLEIENCGTAPRIHSMDDYFMTEVDK
VEESEISKSSGSVRSKKITKKVMEYCYEPEMEEAYRSSMLKSFKKTLDEGAFSFVIVDDR
NLRVADFAQFWATAKRSGYEVYLLEATYKDPAGCAARNVHGFTRDDVQKMAAQWEEAPSM
YLKLDTKSLLHGDALEEGGIQEVDMDMEDDDSLGMPSALDEENIEKFSIPPQEDILADGD
LKDDQESDHEVDQIAEVKGLAKSKWSSDLDEDDTRRNEDATKNLNALSGLIQSYSKEGKS
VRWGDQVTKRGFSIGATKATNVSLLIGPGAGYNLKSNPLPEEEKLISARNNGEPKKQNIF
QERLRAERESFRAVFESFRTGSDKRRHRISGLNAEGE

Transcript Sequence

Gene sequence data has not been registered.